STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4QWH0_KOMPGNuclear pore protein that is part of the evolutionarily conserved Nup84p complex; Belongs to the WD repeat SEC13 family. (320 aa)    
Predicted Functional Partners:
C4R257_KOMPG
Nucleoporin involved in nucleocytoplasmic transport.
   
 0.999
C4R4T7_KOMPG
Essential component of the nuclear pore complex.
   
 0.999
C4R5P3_KOMPG
Essential component of the nuclear pore complex, which mediates nuclear import and export.
   
 0.999
C4R669_KOMPG
Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC).
   
 0.999
C4R6B6_KOMPG
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
C4R6E7_KOMPG
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
SEC13
Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...]
    
0.999
C4R709_KOMPG
Protein with a possible role in regulating expression of nitrogen permeases.
   
 0.998
C4QVL2_KOMPG
Uncharacterized protein.
    
 0.997
C4QYH0_KOMPG
WD_REPEATS_REGION domain-containing protein.
    
 0.997
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.