STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4QXV1_KOMPGProtein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Bp. (124 aa)    
Predicted Functional Partners:
C4QV16_KOMPG
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap.
  
 0.999
C4QV50_KOMPG
60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...]
   
 0.999
C4QVA2_KOMPG
Protein component of the small (40S) ribosomal subunit; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
C4QVD0_KOMPG
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
C4QWC5_KOMPG
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.999
C4QWD2_KOMPG
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
C4QWG3_KOMPG
Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap.
   
 0.999
C4QWG6_KOMPG
Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp.
  
 0.999
C4QWQ6_KOMPG
Protein component of the large (60S) ribosomal subunit, identical to Rpl35Ap.
  
 0.999
C4QWU1_KOMPG
Ribosomal protein L37; Binds to the 23S rRNA.
  
 0.999
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.