STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4QY67_KOMPGTPR_REGION domain-containing protein. (957 aa)    
Predicted Functional Partners:
C4R055_KOMPG
Periodic tryptophan protein 2.
   
    0.846
C4QVT4_KOMPG
U3 small nucleolar RNA-associated protein.
   
    0.829
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
    0.791
C4R169_KOMPG
Nucleolar protein, specifically associated with the U3 snoRNA.
   
  
 0.782
C4R5K1_KOMPG
Nucleolar protein, component of the small subunit (SSU) processome.
   
  
 0.747
C4R315_KOMPG
Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA.
   
    0.717
C4QY42_KOMPG
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.713
C4R793_KOMPG
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.694
C4QY37_KOMPG
Protein required for export of the ribosomal subunits.
   
    0.617
C4R126_KOMPG
Uncharacterized protein.
   
    0.614
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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