STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4QY79_KOMPGDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (113 aa)    
Predicted Functional Partners:
C4QWA8_KOMPG
RNA polymerase subunit, found in RNA polymerase complexes I, II, and III.
   
 0.999
C4QZQ7_KOMPG
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
C4R009_KOMPG
RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III.
   
 0.999
C4R1V1_KOMPG
RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III.
   
 0.999
C4R273_KOMPG
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.999
C4R2U9_KOMPG
RNA polymerase II subunit B32.
   
 0.999
C4R3P8_KOMPG
RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III.
   
 0.999
C4R3Z5_KOMPG
RNA polymerase II subunit B12.5.
   
 0.999
C4R4Y0_KOMPG
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.999
C4R7L2_KOMPG
RNA polymerase II third largest subunit B44, part of central core.
   
 0.999
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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