STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4QZH1_KOMPGUncharacterized protein. (261 aa)    
Predicted Functional Partners:
C4QXU0_KOMPG
Small nuclear ribonucleoprotein Sm D2.
    
 0.992
C4R8X2_KOMPG
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.992
C4QZS1_KOMPG
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.978
C4QYQ5_KOMPG
Small nuclear ribonucleoprotein-associated protein.
    
 0.976
C4QYZ9_KOMPG
Small nuclear ribonucleoprotein Sm D3.
    
 0.972
C4R000_KOMPG
Uncharacterized protein.
   
 0.971
C4R1V6_KOMPG
Core Sm protein Sm F.
    
  0.971
C4QZ61_KOMPG
Small nuclear ribonucleoprotein G.
    
  0.967
C4R4H9_KOMPG
Uncharacterized protein.
    
 0.849
C4R088_KOMPG
Uncharacterized protein.
    
 0.749
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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