STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R1M2_KOMPGRING-type domain-containing protein. (318 aa)    
Predicted Functional Partners:
C4R8V1_KOMPG
Ubiquitin.
   
 0.930
C4R5D4_KOMPG
Ubiquitin-40S ribosomal protein S31 fusion protein.
    
 0.908
C4R1J6_KOMPG
Centromere protein that resembles histones, required for proper kinetochore function.
    
 0.803
C4R5C5_KOMPG
Ubiquitin-conjugating enzyme E2 D; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.724
C4R826_KOMPG
Peroxisomal ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.724
C4QYQ8_KOMPG
Subunit of the heterodimeric FACT complex (Spt16p-Pob3p).
    
 
 0.697
C4R2J6_KOMPG
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.688
C4R2J7_KOMPG
Histone H3; Belongs to the histone H3 family.
    
 0.646
C4R230_KOMPG
Phosphatase tensin-type domain-containing protein.
   
  0.637
C4QV59_KOMPG
Ubiquitin-like domain-containing protein.
    
 0.615
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.