STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R2H6_KOMPGUncharacterized protein. (979 aa)    
Predicted Functional Partners:
C4R899_KOMPG
Subunit of the exosome, which is an essential complex present in both nucleus and cytoplasm.
   
 0.848
C4R631_KOMPG
Protein involved in rRNA processing.
   
 0.847
C4R6E3_KOMPG
Protein involved in rRNA processing.
   
 0.845
C4R514_KOMPG
Protein involved in rRNA processing.
   
 0.837
C4QYI4_KOMPG
Protein involved in rRNA processing.
   
 0.835
C4R4Z2_KOMPG
3'-5' exoribonuclease involved in rRNA processing.
   
 0.834
C4R5G7_KOMPG
Protein involved in rRNA processing.
   
 0.832
C4QXG4_KOMPG
Exonuclease component of the nuclear exosome.
   
 0.819
C4R8J3_KOMPG
Uncharacterized protein.
   
 0.805
C4R1I3_KOMPG
Putative RNA helicase.
   
 0.678
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.