STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R2R7_KOMPGCleavage and polyadenylation factor I (CF I) component. (245 aa)    
Predicted Functional Partners:
C4R018_KOMPG
Cleavage stimulation factor subunit 3.
   
 0.999
C4QVU5_KOMPG
Putative endoribonuclease.
   
 0.994
C4R407_KOMPG
mRNA 3' end processing factor.
    
 0.994
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.994
C4QZW3_KOMPG
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.993
C4QVH3_KOMPG
RNA-binding subunit of the mRNA cleavage and polyadenylation factor.
   
 0.991
C4R554_KOMPG
Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF.
   
 0.988
C4QWX2_KOMPG
One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC).
   
   0.957
C4QWJ6_KOMPG
Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers.
   
 0.955
C4QZ33_KOMPG
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.951
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.