STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R2Z8_KOMPGEssential abundant protein involved in regulation of transcription. (1937 aa)    
Predicted Functional Partners:
C4QXP3_KOMPG
TATA-binding protein, general transcription factor.
    
 
 0.993
C4R279_KOMPG
Subunit of a heterodimeric NC2 transcription regulator complex with Ncb2p.
    
 
 0.878
C4R5V5_KOMPG
Subunit of a heterodimeric NC2 transcription regulator complex with Bur6p.
    
 
 0.813
C4R0B6_KOMPG
Uncharacterized protein.
 
      0.754
C4R289_KOMPG
TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation.
   
  
 0.668
C4QVZ4_KOMPG
Transcription factor TFIIB, a general transcription factor.
    
 
 0.562
C4R3R6_KOMPG
Essential subunit of the histone deacetylase Rpd3S complex.
   
 
 0.519
C4R2G1_KOMPG
TAFII28 domain-containing protein.
      
 0.513
C4R3E4_KOMPG
Transcription initiation protein SPT3.
    
 
 0.499
C4QX73_KOMPG
TFIID subunit (145 kDa).
   
  
 0.490
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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