STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R372_KOMPGUncharacterized protein. (169 aa)    
Predicted Functional Partners:
C4QVV6_KOMPG
DNA repair protein.
    
 
 0.829
C4QXR4_KOMPG
Component of the holoenzyme form of RNA polymerase transcription factor TFIIH.
    
 
 0.702
C4R1U0_KOMPG
Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (With Rad4p).
    
 
 0.490
C4QXV7_KOMPG
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 
 0.470
C4R1T2_KOMPG
5' to 3' DNA helicase, involved in nucleotide excision repair and transcription.
    
 
 0.453
C4QZG9_KOMPG
Transcription initiation factor TFIIH subunit 3.
    
   0.436
C4R6R2_KOMPG
Component of the RNA polymerase II general transcription and DNA repair factor TFIIH.
    
   0.436
C4R792_KOMPG
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
   0.436
C4R8T2_KOMPG
Subunit of TFIIH and nucleotide excision repair factor 3 complexes.
    
   0.436
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.