STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R407_KOMPGmRNA 3' end processing factor. (543 aa)    
Predicted Functional Partners:
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 0.999
C4R018_KOMPG
Cleavage stimulation factor subunit 3.
    
 0.997
C4QZW3_KOMPG
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.995
C4QVU5_KOMPG
Putative endoribonuclease.
   
 0.994
C4R2R7_KOMPG
Cleavage and polyadenylation factor I (CF I) component.
    
 0.994
C4QVH3_KOMPG
RNA-binding subunit of the mRNA cleavage and polyadenylation factor.
    
 0.992
C4R554_KOMPG
Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF.
    
 0.992
C4QYQ1_KOMPG
Transcription/RNA-processing factor.
   
 0.987
C4R485_KOMPG
Subunit of cleavage polyadenylation factor (CPF).
    
 0.938
C4QWJ6_KOMPG
Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers.
    
 0.935
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.