STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Coexpression
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[Homology]
Score
C4R549_KOMPGProtein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (437 aa)    
Predicted Functional Partners:
C4QVI2_KOMPG
Alpha subunit of both the farnesyltransferase and type I geranylgeranyltransferase.
    
 0.999
C4R929_KOMPG
Uncharacterized protein.
    
 0.982
C4R2N6_KOMPG
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.954
C4QY32_KOMPG
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
   
 0.950
C4R682_KOMPG
Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate; Belongs to the FPP/GGPP synthase family.
   
 0.941
C4R915_KOMPG
Hexaprenyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
   
 0.940
C4QX29_KOMPG
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.929
C4R914_KOMPG
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.929
C4QWQ5_KOMPG
Prenyltransferase, required for cell viability.
     
 0.921
C4R470_KOMPG
Farnesyl-diphosphate farnesyl transferase (Squalene synthase).
     
 0.812
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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