STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R576_KOMPGSpliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (146 aa)    
Predicted Functional Partners:
C4R873_KOMPG
Splicing factor, component of the U4/U6-U5 snRNP complex.
    
 0.999
C4QXA9_KOMPG
RNA-dependent ATPase RNA helicase (DEIH box).
    
 0.998
C4R2V3_KOMPG
GTPase component of U5 snRNP involved in mRNA splicing via spliceosome.
    
 0.998
C4R6F6_KOMPG
Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing.
    
 0.998
C4R6X8_KOMPG
Uncharacterized protein.
    
 0.995
C4QWS0_KOMPG
WD_REPEATS_REGION domain-containing protein.
    
 0.992
C4QYZ9_KOMPG
Small nuclear ribonucleoprotein Sm D3.
   
  0.992
C4R2K9_KOMPG
RNA helicase in the DEAD-box family, involved in RNA isomerization at the 5' splice site; Belongs to the DEAD box helicase family.
    
 0.992
C4R5G9_KOMPG
Splicing factor, component of the U4/U6-U5 snRNP complex.
    
 0.988
C4R1V6_KOMPG
Core Sm protein Sm F.
   
  0.981
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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