Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C4QWP4_KOMPG | C4R126_KOMPG | C4QWP4 | C4R126 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Uncharacterized protein. | 0.930 |
C4QWP4_KOMPG | C4R169_KOMPG | C4QWP4 | C4R169 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Nucleolar protein, specifically associated with the U3 snoRNA. | 0.846 |
C4QWP4_KOMPG | C4R202_KOMPG | C4QWP4 | C4R202 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Probable RNA m(5)C methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.909 |
C4QWP4_KOMPG | C4R3V5_KOMPG | C4QWP4 | C4R3V5 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Nucleolar protein. | 0.931 |
C4QWP4_KOMPG | C4R5F2_KOMPG | C4QWP4 | C4R5F2 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Nucleolar DEAD-box protein required for ribosome assembly and function; Belongs to the DEAD box helicase family. | 0.958 |
C4QWP4_KOMPG | C4R782_KOMPG | C4QWP4 | C4R782 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Uncharacterized protein. | 0.960 |
C4QWP4_KOMPG | ERB1 | C4QWP4 | C4QXX4 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.978 |
C4QWP4_KOMPG | NOP7 | C4QWP4 | C4R8Q2 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.949 |
C4QWP4_KOMPG | SPB1 | C4QWP4 | C4R7Z2 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.803 |
C4QWP4_KOMPG | YTM1 | C4QWP4 | C4QVH8 | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.575 |
C4R126_KOMPG | C4QWP4_KOMPG | C4R126 | C4QWP4 | Uncharacterized protein. | Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p. | 0.930 |
C4R126_KOMPG | C4R169_KOMPG | C4R126 | C4R169 | Uncharacterized protein. | Nucleolar protein, specifically associated with the U3 snoRNA. | 0.999 |
C4R126_KOMPG | C4R202_KOMPG | C4R126 | C4R202 | Uncharacterized protein. | Probable RNA m(5)C methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.752 |
C4R126_KOMPG | C4R3V5_KOMPG | C4R126 | C4R3V5 | Uncharacterized protein. | Nucleolar protein. | 0.770 |
C4R126_KOMPG | C4R5F2_KOMPG | C4R126 | C4R5F2 | Uncharacterized protein. | Nucleolar DEAD-box protein required for ribosome assembly and function; Belongs to the DEAD box helicase family. | 0.946 |
C4R126_KOMPG | C4R782_KOMPG | C4R126 | C4R782 | Uncharacterized protein. | Uncharacterized protein. | 0.833 |
C4R126_KOMPG | ERB1 | C4R126 | C4QXX4 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.964 |
C4R126_KOMPG | NOP7 | C4R126 | C4R8Q2 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.511 |
C4R126_KOMPG | SPB1 | C4R126 | C4R7Z2 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.627 |
C4R126_KOMPG | YTM1 | C4R126 | C4QVH8 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.780 |
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