STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R5G9_KOMPGSplicing factor, component of the U4/U6-U5 snRNP complex. (447 aa)    
Predicted Functional Partners:
C4R3D6_KOMPG
Uncharacterized protein.
   
 0.997
C4R6B8_KOMPG
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.997
C4R6X8_KOMPG
Uncharacterized protein.
   
 0.997
C4QXA9_KOMPG
RNA-dependent ATPase RNA helicase (DEIH box).
    
 0.996
C4R1W1_KOMPG
Splicing factor, component of the U4/U6-U5 snRNP complex.
   
 0.995
C4R873_KOMPG
Splicing factor, component of the U4/U6-U5 snRNP complex.
   
 0.995
C4R6F6_KOMPG
Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing.
    
 0.994
C4R7E0_KOMPG
Uncharacterized protein.
    
 0.993
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.992
C4R3Q0_KOMPG
MFAP1 domain-containing protein.
   
 0.989
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.