STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R7J0_KOMPGSignal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (518 aa)    
Predicted Functional Partners:
C4QXI9_KOMPG
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.999
C4QXS3_KOMPG
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
   
 0.999
C4R4S2_KOMPG
SRP9-21 domain-containing protein.
   
 0.999
C4R4U7_KOMPG
Subunit of the signal recognition particle (SRP), involved in protein targeting to the ER.
   
 0.999
C4R0H7_KOMPG
Signal recognition particle (SRP) receptor-alpha subunit.
 
0.995
C4R910_KOMPG
Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit; Belongs to the universal ribosomal protein uL23 family.
   
 0.993
C4QWQ6_KOMPG
Protein component of the large (60S) ribosomal subunit, identical to Rpl35Ap.
   
 
 0.990
C4R7C6_KOMPG
Protein component of the large (60S) ribosomal subunit.
  
 0.987
C4QWU8_KOMPG
Protein component of the large (60S) ribosomal subunit.
  
 
 0.986
C4QVA2_KOMPG
Protein component of the small (40S) ribosomal subunit; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.922
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.