STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R8F1_KOMPGRanBD1 domain-containing protein. (362 aa)    
Predicted Functional Partners:
C4R4T7_KOMPG
Essential component of the nuclear pore complex.
   
 0.999
C4R5P3_KOMPG
Essential component of the nuclear pore complex, which mediates nuclear import and export.
   
 0.999
C4R2E8_KOMPG
Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus.
    
 
 0.923
C4R0Q2_KOMPG
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.886
C4R8Q5_KOMPG
GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport.
   
 0.883
C4R540_KOMPG
Nuclear pore protein.
   
 0.852
C4R1I9_KOMPG
SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.837
C4R714_KOMPG
Abundant subunit of the nuclear pore complex (NPC).
   
 0.831
C4R5U1_KOMPG
NUP214 domain-containing protein.
   
 0.790
C4R7M3_KOMPG
Nucleoporin, essential subunit of the nuclear pore complex (NPC).
   
 0.772
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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