STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP9Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (645 aa)    
Predicted Functional Partners:
C4R4Y5_KOMPG
Component of the small (Ribosomal) subunit (SSU) processosome required for pre-18S rRNa processing.
   
   0.973
C4R0D8_KOMPG
Uncharacterized protein.
 
      0.899
C4R8N8_KOMPG
Protein associated with U3 and U14 snoRNAs.
   
 
 0.882
C4R802_KOMPG
Uncharacterized protein.
   
 
 0.851
C4R447_KOMPG
Essential protein possibly involved in secretion.
   
 
 0.850
C4R7D7_KOMPG
Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis.
   
   0.846
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.838
C4QWP4_KOMPG
Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p.
   
    0.836
C4R8Q3_KOMPG
Essential conserved protein that is part of the 90S preribosome.
   
 
 0.835
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
    0.826
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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