STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC68738.1KEGG: mvu:Metvu_1087 hypothetical protein. (88 aa)    
Predicted Functional Partners:
ADC68739.1
PFAM: ATP-cone domain protein; KEGG: mfe:Mefer_0922 anaerobic ribonucleoside-triphosphate reductase.
       0.773
ADC68740.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mvu:Metvu_1627 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.768
ADC68737.1
KEGG: mvu:Metvu_1086 hypothetical protein.
       0.748
ADC68736.1
Nitrogenase; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mvu:Metvu_1085 nitrogenase.
       0.552
ADC68741.1
KEGG: mvu:Metvu_0865 hypothetical protein.
       0.494
ADC68742.1
PFAM: oxidoreductase/nitrogenase component 1; KEGG: mvu:Metvu_0866 oxidoreductase/nitrogenase component 1.
       0.494
ADC68735.1
KEGG: mvu:Metvu_1084 nitrogenase component I, alpha chain; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase alpha chain; PFAM: oxidoreductase/nitrogenase component 1.
       0.420
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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