STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC68848.1PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mja:MJ1614 hypothetical protein. (251 aa)    
Predicted Functional Partners:
ADC68849.1
PFAM: protein of unknown function DUF105; KEGG: mja:MJ1613 hypothetical protein.
 
     0.948
ADC68847.1
PFAM: Protein of unknown function DUF439; KEGG: mja:MJ1615 hypothetical protein.
       0.777
ADC70346.1
PFAM: PfkB domain protein; KEGG: mja:MJ0406 ribokinase (RbsK); Belongs to the carbohydrate kinase PfkB family.
 
  
 0.644
ADC69103.1
PFAM: PfkB domain protein; KEGG: mfe:Mefer_0531 PfkB domain protein.
  
  
 0.576
ADC69501.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mja:MJ1188 hypothetical protein.
 
     0.571
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.513
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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