STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC68852.1TIGRFAM: oligosaccharide amylase; PFAM: glycoside hydrolase 15-related; KEGG: mja:MJ1610 glucoamylase (cga). (612 aa)    
Predicted Functional Partners:
ADC68851.1
Alpha-amylase; PFAM: glycoside hydrolase family 57; KEGG: mja:MJ1611 alpha-amylase (AmyA).
 
  
 0.920
ADC68854.1
PFAM: Protein of unknown function DUF2582; KEGG: mja:MJ1608 hypothetical protein.
       0.842
ADC68855.1
PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mja:MJ1607 LPS biosynthesis protein, putative.
 
   
 0.787
apgM
Phosphonopyruvate decarboxylase-related protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.731
ADC68853.1
PFAM: ATPase; SMART: AAA ATPase; KEGG: mja:MJ0147 hypothetical protein.
       0.714
ADC68856.1
Starch synthase; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mja:MJ1606 glycogen synthase (GlgA).
  
  
 0.641
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: mja:MJ1605 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
    0.525
ADC69331.1
TIGRFAM: alpha-glucan phosphorylase; KEGG: mja:MJ1631 glycogen phosphorylase (GlgP).
 
  
 0.490
ADC69551.1
PFAM: class II aldolase/adducin family protein; KEGG: mja:MJ1418 fuculose-1-phosphate aldolase (FucA).
   
  
 0.475
pcm
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
  
    0.471
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.