STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC68854.1PFAM: Protein of unknown function DUF2582; KEGG: mja:MJ1608 hypothetical protein. (70 aa)    
Predicted Functional Partners:
ADC68852.1
TIGRFAM: oligosaccharide amylase; PFAM: glycoside hydrolase 15-related; KEGG: mja:MJ1610 glucoamylase (cga).
       0.842
ADC68855.1
PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mja:MJ1607 LPS biosynthesis protein, putative.
       0.795
ADC68851.1
Alpha-amylase; PFAM: glycoside hydrolase family 57; KEGG: mja:MJ1611 alpha-amylase (AmyA).
       0.760
ADC68853.1
PFAM: ATPase; SMART: AAA ATPase; KEGG: mja:MJ0147 hypothetical protein.
       0.705
apgM
Phosphonopyruvate decarboxylase-related protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.649
ADC68856.1
Starch synthase; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mja:MJ1606 glycogen synthase (GlgA).
       0.415
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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