STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC68941.1PFAM: protein of unknown function DUF505; KEGG: mja:MJ1355 hypothetical protein. (571 aa)    
Predicted Functional Partners:
ADC69649.1
PFAM: Protein of unknown function DUF2341; KEGG: mja:MJ1470 hypothetical protein.
  
     0.705
ADC68950.1
PFAM: legume lectin beta domain; KEGG: mja:MJ1396 hypothetical protein.
  
     0.693
ADC69363.1
PFAM: THUMP domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mja:MJ1257 hypothetical protein.
  
     0.681
ADC68947.1
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: mja:MJ1398 hypothetical protein.
  
     0.665
ADC70324.1
PFAM: zinc/iron permease; KEGG: mfe:Mefer_1258 zinc/iron permease.
  
     0.657
ADC69042.1
PFAM: Type II secretion system F domain; KEGG: mja:MJ1286 hypothetical protein.
  
     0.607
ADC70037.1
PFAM: ATPase; SMART: AAA ATPase; KEGG: mja:MJ0147 hypothetical protein.
  
     0.605
ADC69340.1
Transcriptional regulator, TrmB; PFAM: domain of unknown function DUF1745; FIST C domain; transcriptional regulator TrmB; KEGG: mja:MJ1623 hypothetical protein.
  
     0.589
ADC69275.1
TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; PFAM: protein of unknown function DUF324; KEGG: mja:MJ1667 hypothetical protein.
 
     0.579
ADC69366.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: mja:MJ1254 hypothetical protein.
  
     0.571
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.