nac protein (Methanocaldococcus sp. FS40622)

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nac

alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. (126 aa)

Predicted Functional Partners:

rpl18e

0.992

rpl21e

0.989

rpl18a

0.989

rpl18

0.986

rpl19e

0.982

rpl30

0.977

rpl24e

0.974

rpl23

0.971

rpl10

0.968

rpl31e

0.967

Your Current Organism:

Methanocaldococcus sp. FS40622

NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
nac	rpl10	MFS40622_0266	MFS40622_1798	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.968
nac	rpl18	MFS40622_0266	MFS40622_1745	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.986
nac	rpl18a	MFS40622_0266	MFS40622_1577	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	PFAM: Ribosomal LX protein; KEGG: mfe:Mefer_1382 ribosomal LX protein.	0.989
nac	rpl18e	MFS40622_0266	MFS40622_0084	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	PFAM: ribosomal protein L15; KEGG: mja:MJ0193 50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.992
nac	rpl19e	MFS40622_0266	MFS40622_1744	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.	0.982
nac	rpl21e	MFS40622_0266	MFS40622_0939	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	PFAM: Ribosomal protein L21e; KEGG: mja:MJ0040 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.989
nac	rpl23	MFS40622_0266	MFS40622_0094	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	Ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.971
nac	rpl24e	MFS40622_0266	MFS40622_0833	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	Ribosomal protein L24E; Binds to the 23S rRNA.	0.974
nac	rpl30	MFS40622_0266	MFS40622_1747	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: mja:MJ0476 50S ribosomal protein L30P.	0.977
nac	rpl31e	MFS40622_0266	MFS40622_0457	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	PFAM: Ribosomal protein L31e; KEGG: mja:MJ0049 50S ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.967
rpl10	nac	MFS40622_1798	MFS40622_0266	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	0.968
rpl10	rpl18	MFS40622_1798	MFS40622_1745	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rpl10	rpl18a	MFS40622_1798	MFS40622_1577	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	PFAM: Ribosomal LX protein; KEGG: mfe:Mefer_1382 ribosomal LX protein.	0.997
rpl10	rpl18e	MFS40622_1798	MFS40622_0084	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	PFAM: ribosomal protein L15; KEGG: mja:MJ0193 50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.998
rpl10	rpl19e	MFS40622_1798	MFS40622_1744	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
rpl10	rpl21e	MFS40622_1798	MFS40622_0939	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	PFAM: Ribosomal protein L21e; KEGG: mja:MJ0040 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.998
rpl10	rpl23	MFS40622_1798	MFS40622_0094	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.999
rpl10	rpl24e	MFS40622_1798	MFS40622_0833	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L24E; Binds to the 23S rRNA.	0.999
rpl10	rpl30	MFS40622_1798	MFS40622_1747	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: mja:MJ0476 50S ribosomal protein L30P.	0.999
rpl10	rpl31e	MFS40622_1798	MFS40622_0457	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	PFAM: Ribosomal protein L31e; KEGG: mja:MJ0049 50S ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.998