STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69121.1Transcriptional regulator NikR, CopG family; PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: mja:MJ0080 hypothetical protein. (127 aa)    
Predicted Functional Partners:
ADC69122.1
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mja:MJ0079 regulatory protein, putative (MoxR).
       0.798
ADC69123.1
KEGG: mja:MJ0078 hypothetical protein.
       0.798
mtrA
Tetrahydromethanopterin S-methyltransferase, subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family.
  
     0.561
ADC69586.1
TIGRFAM: methanogenesis marker protein 14; PFAM: conserved hypothetical protein; KEGG: mja:MJ1451 hypothetical protein.
  
     0.556
ADC69668.1
TIGRFAM: methanogenesis marker protein 9; KEGG: mja:MJ0115 hypothetical protein.
  
     0.527
mtrG
Tetrahydromethanopterin S-methyltransferase, subunit G; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step.
  
     0.522
ADC69484.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mja:MJ1167 formylmethanofuran dehydrogenase, subunit G (tungsten) (FwdG).
  
     0.485
ADC69485.1
PFAM: molydopterin dinucleotide-binding region; KEGG: mja:MJ1168 formylmethanofuran dehydrogenase, subunit D (tungsten) (FwdD).
  
     0.473
ADC68814.1
PFAM: Protein of unknown function DUF128; Ribonuclease R winged-helix domain protein; KEGG: mja:MJ0159 hypothetical protein.
 
     0.469
ADC69513.1
PFAM: phosphoesterase RecJ domain protein; RNA binding S1 domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mja:MJ1198 hypothetical protein.
  
     0.459
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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