STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69160.1PFAM: Protein of unknown function DUF357; KEGG: mja:MJ0273 hypothetical protein. (98 aa)    
Predicted Functional Partners:
ADC69162.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mja:MJ0272 repressor protein, putative (yorfE).
       0.783
ADC69163.1
KEGG: mja:MJ0271 hypothetical protein.
       0.783
ADC69161.1
PFAM: GCN5-related N-acetyltransferase; KEGG: tgr:Tgr7_1703 GCN5-related N-acetyltransferase.
       0.773
ADC69164.1
KEGG: cpc:Cpar_1446 membrane protein required for N-linked glycosylation-like protein.
       0.773
ADC70306.1
PFAM: PUA domain containing protein; SMART: PUA domain containing protein; KEGG: mja:MJ1022 queuine tRNA-ribosyltransferase.
  
     0.574
ADC69336.1
PFAM: Protein of unknown function UPF0179; KEGG: mja:MJ1627 hypothetical protein; Belongs to the UPF0179 family.
 
     0.551
ADC69016.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mja:MJ0550 hypothetical protein.
  
     0.544
ADC69549.1
Peptidase S16, Lon-like protease; KEGG: mja:MJ1417 ATP-dependent protease La, putative (lon); TIGRFAM: peptidase S16, Lon-like protease; PFAM: peptidase S16 lon domain protein; SMART: AAA ATPase; Belongs to the peptidase S16 family.
  
     0.526
ADC69705.1
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mja:MJ0977 hypothetical protein.
  
     0.519
ADC69481.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mja:MJ1164 hypothetical protein.
  
     0.513
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.