STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69212.1PFAM: Carboxymuconolactone decarboxylase; KEGG: mja:MJ1511 hypothetical protein. (107 aa)    
Predicted Functional Partners:
ADC70109.1
PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: mja:MJ0741 desulfoferrodoxin, putative (rbo).
 
  
 0.843
ADC70111.1
PFAM: Hypothetical protein MTH865; KEGG: mfe:Mefer_1057 hypothetical protein MTH865.
  
    0.786
ADC70112.1
KEGG: mfe:Mefer_1055 hypothetical protein.
  
  
 0.777
ADC70115.1
KEGG: mfe:Mefer_1051 hypothetical protein.
 
    0.764
ADC69060.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mja:MJ1302 ferredoxin.
 
    0.542
taw3
Protein of unknown function DUF207; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family.
       0.515
ADC70113.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.485
ADC69858.1
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: mja:MJ0929 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.474
ADC69077.1
PFAM: major facilitator superfamily MFS_1; KEGG: mja:MJ1317 hypothetical protein.
  
    0.454
ADC69414.1
PFAM: major facilitator superfamily MFS_1; KEGG: mvu:Metvu_1538 major facilitator superfamily MFS_1.
  
    0.454
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.