STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69240.1PFAM: Protein of unknown function DUF2283; KEGG: mvu:Metvu_1348 protein of unknown function DUF2283. (70 aa)    
Predicted Functional Partners:
ADC69241.1
KEGG: tsi:TSIB_1934 hypothetical protein.
       0.806
ADC69242.1
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; KEGG: mja:MJ1378 carbamoyl-phosphate synthase, medium subunit (carB1).
       0.735
ADC69239.1
KEGG: cce:Ccel_1113 UbiA prenyltransferase.
       0.732
ADC69851.1
TIGRFAM: CRISPR-associated regulatory protein, Csa2 family; CRISPR-associated autoregulator DevR family; PFAM: CRISPR-associated regulatory Csa2 family protein; KEGG: mfe:Mefer_1436 CRISPR-associated autoregulator, DevR family.
  
     0.674
ADC69238.1
PFAM: MGS domain protein; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthase L chain ATP-binding; KEGG: mja:MJ1381 carbamoyl-phosphate synthase, large subunit (carB2).
       0.612
ADC69127.1
PFAM: plasmid stabilization system; KEGG: mja:MJ0071 hypothetical protein.
 
     0.607
ADC69854.1
KEGG: mfe:Mefer_1433 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
 
     0.532
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
       0.503
ADC69319.1
Transcriptional regulator, XRE family; PFAM: Replication factor C; helix-turn-helix domain protein; SMART: Hedgehog/intein hint domain protein; helix-turn-helix domain protein; KEGG: mja:MJ1422 replication factor C small subunit.
  
     0.476
ADC69599.1
PFAM: protein of unknown function DUF996; KEGG: mja:MJ1644 hypothetical protein.
  
     0.445
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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