STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppSUndecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (277 aa)    
Predicted Functional Partners:
ADC69979.1
PFAM: Polyprenyl synthetase; KEGG: mja:MJ0860 bifunctional short chain isoprenyl diphosphate synthase (IdsA); Belongs to the FPP/GGPP synthase family.
 
 
 0.980
ADC69862.1
PFAM: protein of unknown function DUF92 transmembrane; KEGG: mja:MJ0933 hypothetical protein.
     
 0.906
ADC69247.1
KEGG: mja:MJ1373 hypothetical protein.
       0.897
ADC69702.1
PFAM: peptidase M50; KEGG: mja:MJ0971 hypothetical protein.
  
  
 0.826
ADC69249.1
TIGRFAM: methanogen marker protein 4; KEGG: mja:MJ1371 methlytransferase.
  
    0.825
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
  
 0.806
nusA
NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family.
  
    0.798
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.787
ADC69250.1
TIGRFAM: methanogenesis marker protein 12; KEGG: mja:MJ1370 hypothetical protein; Belongs to the UPF0285 family.
       0.782
ADC69246.1
KEGG: mja:MJ1374 hypothetical protein.
  
    0.746
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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