STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69269.1TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein TM1812; KEGG: mja:MJ1674 hypothetical protein. (632 aa)    
Predicted Functional Partners:
ADC69270.1
KEGG: mja:MJ1673 hypothetical protein.
 
     0.934
ADC69271.1
TIGRFAM: CRISPR-associated protein, Csm1 family; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mvu:Metvu_1147 CRISPR-associated protein, Csm1 family.
 
   
 0.904
ADC69272.1
TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: CRISPR-associated protein TM1810 domain protein; KEGG: mja:MJ1670 hypothetical protein.
 
     0.873
ADC69273.1
TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: mja:MJ1669 hypothetical protein.
 
   
 0.862
ADC69275.1
TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; PFAM: protein of unknown function DUF324; KEGG: mja:MJ1667 hypothetical protein.
 
   
 0.858
ADC69274.1
TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; PFAM: protein of unknown function DUF324; KEGG: mfe:Mefer_0968 CRISPR-associated RAMP protein, Csm4 family.
 
   
 0.852
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
       0.550
ADC69649.1
PFAM: Protein of unknown function DUF2341; KEGG: mja:MJ1470 hypothetical protein.
  
     0.505
ADC69843.1
TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: mja:MJ0375 hypothetical protein.
 
   
 0.500
ADC68941.1
PFAM: protein of unknown function DUF505; KEGG: mja:MJ1355 hypothetical protein.
  
     0.494
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.