STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69325.1PFAM: Queuosine synthesis-like; KEGG: mja:MJ1638 hypothetical protein. (260 aa)    
Predicted Functional Partners:
ADC69323.1
PFAM: PhoU family protein; KEGG: mfe:Mefer_1330 phosphate uptake regulator, PhoU.
 
     0.844
trmY
Protein of unknown function DUF358; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
       0.778
ADC68815.1
TIGRFAM: pyridoxal phosphate enzyme; KEGG: mja:MJ0158 selenocystein synthase (SelA).
  
     0.714
ADC69200.1
PFAM: protein of unknown function DUF192; KEGG: mja:MJ1496 hypothetical protein.
 
     0.615
ADC69229.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mja:MJ1525 putative transmembrane oligosaccharyl transferase.
  
     0.589
ADC69259.1
PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mja:MJ0138 cobyrinic acid a,c-diamide synthase.
  
     0.587
ADC70271.1
KEGG: mja:MJ0981 hypothetical protein.
  
     0.568
ADC68745.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; KEGG: mja:MJ1120 hypothetical protein.
  
     0.555
ADC70143.1
PFAM: protein of unknown function DUF95 transmembrane; KEGG: mja:MJ0706 hypothetical protein.
  
     0.550
ADC69880.1
TIGRFAM: cytidyltransferase-related domain protein; PFAM: protein of unknown function DUF795; Citrate lyase ligase domain protein; KEGG: mja:MJ0951 hypothetical protein.
  
     0.549
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.