STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69398.1TIGRFAM: alpha-ribazole phosphatase CobZ; PFAM: phosphatidylglycerophosphatase A; KEGG: mfe:Mefer_0538 alpha-ribazole phosphatase CobZ. (143 aa)    
Predicted Functional Partners:
ADC69399.1
PFAM: ATPase; SMART: AAA ATPase; KEGG: mja:MJECL26 putative ATP-binding protein.
       0.773
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
  
  0.657
ADC69533.1
PFAM: Protein of unknown function DUF61; KEGG: mja:MJ1224 hypothetical protein; Belongs to the UPF0216 family.
 
     0.609
ADC69400.1
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; Protein of unknown function DUF1998; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfe:Mefer_0539 DEAD/DEAH box helicase domain protein.
       0.574
ADC69133.1
PFAM: conserved hypothetical protein; KEGG: mja:MJ0065 hypothetical protein.
  
     0.562
ADC69914.1
TIGRFAM: methanogenesis marker protein 11; PFAM: domain of unknown function DUF1743; KEGG: mja:MJ0921 hypothetical protein.
 
     0.557
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
 
  
 0.541
ADC69543.1
TIGRFAM: methanogenesis marker protein 3; KEGG: mja:MJ1412 hypothetical protein; Belongs to the UPF0288 family.
 
     0.539
ADC68748.1
KEGG: mja:MJ1117 hypothetical protein.
 
     0.487
ADC69318.1
TIGRFAM: methanogenesis marker 13 metalloprotein; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mja:MJ1423 vanadium nitrogenase-associated protein N.
 
     0.478
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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