STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69401.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1572 cobalt transport ATP-binding protein (CbiO). (277 aa)    
Predicted Functional Partners:
ADC69402.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mja:MJ1571 cobalt transport protein (CbiQ).
 
 0.999
ADC69404.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mja:MJ1569 cobalt transport protein CbiM.
 
 0.994
ADC68866.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mja:MJ1089 cobalt transport protein (CbiQ).
 
 0.992
ADC69403.1
KEGG: mja:MJ1570 hypothetical protein.
 
 0.992
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.981
ecfA
Cobalt ABC transporter, ATPase subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.911
cbiN
Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
  
 
 0.891
ADC69208.1
PFAM: protein of unknown function DUF214; KEGG: mja:MJ1507 hypothetical protein.
 
    0.838
ADC69280.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1662 methyl coenzyme M reductase system, component A2-like.
 
 
0.834
ADC69381.1
KEGG: mja:MJ1242 methyl coenzyme M reductase system, component A2 (AtwA); TIGRFAM: methyl coenzyme M reductase system, component A2; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
0.828
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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