STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69690.1PFAM: protein of unknown function DUF75; KEGG: mja:MJ0106 hypothetical protein. (234 aa)    
Predicted Functional Partners:
ADC69691.1
PFAM: Protein of unknown function DUF473; KEGG: mja:MJ0105 hypothetical protein.
  
 
 0.995
psmA
Proteasome endopeptidase complex, alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
   
 
 0.919
psmB
Proteasome endopeptidase complex, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 
 
 0.776
ADC69524.1
PFAM: protein of unknown function DUF75; KEGG: mja:MJ1210 hypothetical protein.
 
 
 
0.677
dnaG
TOPRIM domain protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
 
   
 0.625
ADC70320.1
PFAM: Protein of unknown function DUF373; KEGG: mvu:Metvu_0299 protein of unknown function DUF373.
 
     0.621
ADC70378.1
PFAM: Protein of unknown function DUF63; KEGG: mja:MJ0440 hypothetical protein.
  
     0.614
tgtA
Archaeosine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
 
     0.612
ADC69428.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mja:MJ1545 hypothetical protein.
  
   
 0.548
ADC69622.1
PFAM: Protein of unknown function DUF655; KEGG: mja:MJ0038 hypothetical protein.
 
     0.543
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.