STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69714.1Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mfe:Mefer_0207 transcriptional regulator, XRE family. (172 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
    0.767
ADC69143.1
TIGRFAM: methanogenesis marker protein 8; PFAM: conserved hypothetical protein; KEGG: mja:MJ0054 hypothetical protein.
  
    0.728
ADC69249.1
TIGRFAM: methanogen marker protein 4; KEGG: mja:MJ1371 methlytransferase.
  
   
 0.718
ADC70344.1
TIGRFAM: methanogenesis marker protein 5; PFAM: conserved hypothetical protein; KEGG: mja:MJ0404 hypothetical protein.
  
     0.648
ADC70002.1
PFAM: cysteine-rich small domain; KEGG: mja:MJ0836 hypothetical protein.
  
     0.646
ADC70440.1
TIGRFAM: methanogenesis marker protein 6; PFAM: conserved hypothetical protein; KEGG: mja:MJ0498 hypothetical protein.
  
     0.643
ADC69393.1
TIGRFAM: methanogenesis marker protein 7; PFAM: Protein of unknown function UCP019164; KEGG: mja:MJ0094 methyl coenzyme M reductase II, operon protein C (MtrC).
  
     0.630
ADC69543.1
TIGRFAM: methanogenesis marker protein 3; KEGG: mja:MJ1412 hypothetical protein; Belongs to the UPF0288 family.
  
     0.624
ADC69992.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
     0.605
ADC69318.1
TIGRFAM: methanogenesis marker 13 metalloprotein; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mja:MJ1423 vanadium nitrogenase-associated protein N.
  
     0.596
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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