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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69914.1TIGRFAM: methanogenesis marker protein 11; PFAM: domain of unknown function DUF1743; KEGG: mja:MJ0921 hypothetical protein. (300 aa)    
Predicted Functional Partners:
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp).
  
    0.969
ADC69249.1
TIGRFAM: methanogen marker protein 4; KEGG: mja:MJ1371 methlytransferase.
 
     0.743
ADC69994.1
TIGRFAM: methyl-coenzyme M reductase I operon protein C; PFAM: Methyl-coenzyme M reductase protein C; KEGG: mja:MJ0844 methyl coenzyme M reductase I, operon protein C (McrC).
 
     0.732
ADC69393.1
TIGRFAM: methanogenesis marker protein 7; PFAM: Protein of unknown function UCP019164; KEGG: mja:MJ0094 methyl coenzyme M reductase II, operon protein C (MtrC).
  
     0.723
ADC69543.1
TIGRFAM: methanogenesis marker protein 3; KEGG: mja:MJ1412 hypothetical protein; Belongs to the UPF0288 family.
  
    0.717
ADC70440.1
TIGRFAM: methanogenesis marker protein 6; PFAM: conserved hypothetical protein; KEGG: mja:MJ0498 hypothetical protein.
  
     0.715
ADC69118.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
     0.714
ADC69992.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
     0.714
ADC70344.1
TIGRFAM: methanogenesis marker protein 5; PFAM: conserved hypothetical protein; KEGG: mja:MJ0404 hypothetical protein.
  
     0.714
ADC69913.1
PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mja:MJ0922 hypothetical protein.
       0.713
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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