STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC69981.1PFAM: Protein of unknown function DUF749; KEGG: mja:MJ0858 hypothetical protein. (100 aa)    
Predicted Functional Partners:
ADC69982.1
PFAM: Uncharacterised conserved protein UCP037052; KEGG: mja:MJ0856 hypothetical protein.
  
    0.992
ADC69980.1
PFAM: Protein of unknown function DUF2118; KEGG: mfe:Mefer_1119 protein of unknown function DUF2118.
       0.901
ADC69034.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mja:MJ1404 hypothetical protein.
  
    0.812
ADC69979.1
PFAM: Polyprenyl synthetase; KEGG: mja:MJ0860 bifunctional short chain isoprenyl diphosphate synthase (IdsA); Belongs to the FPP/GGPP synthase family.
       0.683
rnj
RNA-metabolising metallo-beta-lactamase; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily.
       0.615
ADC68997.1
PFAM: UspA domain protein; KEGG: mja:MJ0531 hypothetical protein.
   
    0.532
ADC68887.1
TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mja:MJ1582 hypothetical protein.
       0.426
ADC70227.1
PFAM: UspA domain protein; KEGG: mja:MJ0577 hypothetical protein.
   
    0.416
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.