STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC70000.1PFAM: Protein of unknown function DUF166; KEGG: mja:MJ0838 hypothetical protein. (220 aa)    
Predicted Functional Partners:
ADC70031.1
PFAM: protein of unknown function DUF98; KEGG: mja:MJ0807 hypothetical protein.
  
     0.637
ADC70098.1
PFAM: Protein of unknown function DUF166; KEGG: mja:MJ0757 hypothetical protein.
  
     0.630
cdhA
CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
 
     0.623
ADC70247.1
Brix domain protein; Probably involved in the biogenesis of the ribosome.
  
     0.595
ADC70143.1
PFAM: protein of unknown function DUF95 transmembrane; KEGG: mja:MJ0706 hypothetical protein.
  
     0.541
ADC69676.1
PFAM: Fe-S cluster domain protein; KEGG: mja:MJ0119 carbon monoxide dehydrogenase gamma subunit (CdhE) isolog.
  
     0.531
cdhD
CO dehydrogenase/acetyl-CoA synthase, delta subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably maintains the overall quaternary structure of the ACDS complex. Belongs to the CdhD family.
 
     0.530
ADC69325.1
PFAM: Queuosine synthesis-like; KEGG: mja:MJ1638 hypothetical protein.
  
     0.529
ADC70197.1
PFAM: glutamate synthase alpha subunit domain protein; KEGG: mfe:Mefer_0950 glutamate synthase alpha subunit domain protein.
 
     0.527
ADC69229.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mja:MJ1525 putative transmembrane oligosaccharyl transferase.
  
     0.493
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.