STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC70029.1PFAM: AMMECR1 domain protein; KEGG: mja:MJ0810 hypothetical protein. (201 aa)    
Predicted Functional Partners:
ADC70342.1
PFAM: protein of unknown function DUF52; KEGG: mja:MJ0403 hypothetical protein; Belongs to the MEMO1 family.
    0.988
ADC70030.1
PFAM: Radical SAM domain protein; KEGG: mja:MJ0808 pyruvate-formate-lyase-activating enzyme (act).
     0.975
ADC70031.1
PFAM: protein of unknown function DUF98; KEGG: mja:MJ0807 hypothetical protein.
       0.580
ADC70032.1
PFAM: peptidase M24; creatinase; KEGG: mja:MJ0806 X-Pro aminopeptidase (PepQ).
  
    0.451
ADC70241.1
TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain protein; PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: mja:MJ0590 hypothetical protein.
       0.428
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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