STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC70073.1PFAM: Type II secretion system F domain; KEGG: mja:MJ0779 hypothetical protein. (299 aa)    
Predicted Functional Partners:
ADC70072.1
PFAM: Type II secretion system F domain; KEGG: mja:MJ0780 hypothetical protein.
  
  
 0.998
ADC70071.1
PFAM: type II secretion system protein E; SMART: Hedgehog/intein hint domain protein; AAA ATPase; KEGG: mja:MJ0781 type II secretion system protein.
 
  
 0.881
ADC70078.1
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; ATPase; SMART: regulatory protein ArsR; AAA ATPase; KEGG: mja:MJ0774 hypothetical protein.
 
     0.723
ADC69413.1
KEGG: mvu:Metvu_0987 hypothetical protein.
 
     0.677
tfb
Transcription factor TFIIB cyclin-related protein; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
       0.654
ADC69229.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mja:MJ1525 putative transmembrane oligosaccharyl transferase.
 
   
 0.653
ADC70100.1
PFAM: putative cell wall binding repeat 2-containing protein; KEGG: mja:MJ0755 N-acetylmuramoyl-L-alanine amidase.
 
     0.646
ADC69933.1
PFAM: Peptidase A24B, FlaK domain protein; peptidase A24A prepilin type IV; KEGG: mja:MJ0902 hypothetical protein.
 
   
 0.642
ADC70069.1
KEGG: mja:MJ0782.1 H/ACA RNA-protein complex component Gar1.
       0.637
ADC69366.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: mja:MJ1254 hypothetical protein.
  
     0.629
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.