STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC70107.1Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mja:MJ0729 hypothetical protein. (124 aa)    
Predicted Functional Partners:
ADC70108.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: mfe:Mefer_1060 carboxymuconolactone decarboxylase.
 
     0.742
ADC69229.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mja:MJ1525 putative transmembrane oligosaccharyl transferase.
  
     0.674
ADC69259.1
PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mja:MJ0138 cobyrinic acid a,c-diamide synthase.
  
     0.674
ADC70031.1
PFAM: protein of unknown function DUF98; KEGG: mja:MJ0807 hypothetical protein.
  
     0.634
ADC70251.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mja:MJ0597 hypothetical protein.
  
     0.614
gap
Glyceraldehyde-3-phosphate dehydrogenase, type II; KEGG: mja:MJ1146 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain.
      
 0.572
ADC68815.1
TIGRFAM: pyridoxal phosphate enzyme; KEGG: mja:MJ0158 selenocystein synthase (SelA).
  
     0.548
ADC70109.1
PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: mja:MJ0741 desulfoferrodoxin, putative (rbo).
 
     0.517
ADC70078.1
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; ATPase; SMART: regulatory protein ArsR; AAA ATPase; KEGG: mja:MJ0774 hypothetical protein.
  
     0.514
ADC69250.1
TIGRFAM: methanogenesis marker protein 12; KEGG: mja:MJ1370 hypothetical protein; Belongs to the UPF0285 family.
  
     0.496
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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