STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC70212.1PFAM: heat shock protein Hsp20; KEGG: mja:MJ0285 small heat shock protein (HSP20). (147 aa)    
Predicted Functional Partners:
ADC70285.1
TIGRFAM: thermosome; PFAM: chaperonin Cpn60/TCP-1; KEGG: mja:MJ0999 thermosome (ths).
  
  
 0.912
rpl10e
TIGRFAM: ribosomal protein L10.e; PFAM: Ribosomal protein L10e/L16; KEGG: mja:MJ0543 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.812
ADC69549.1
Peptidase S16, Lon-like protease; KEGG: mja:MJ1417 ATP-dependent protease La, putative (lon); TIGRFAM: peptidase S16, Lon-like protease; PFAM: peptidase S16 lon domain protein; SMART: AAA ATPase; Belongs to the peptidase S16 family.
  
  
 0.665
ADC70231.1
Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro.
  
  
 0.617
ADC69319.1
Transcriptional regulator, XRE family; PFAM: Replication factor C; helix-turn-helix domain protein; SMART: Hedgehog/intein hint domain protein; helix-turn-helix domain protein; KEGG: mja:MJ1422 replication factor C small subunit.
   
 
 0.601
ADC70213.1
PFAM: ribosomal L11 methyltransferase; KEGG: mja:MJ0284 hypothetical protein.
       0.589
ADC70105.1
PFAM: Rubrerythrin; KEGG: mja:MJ0746 hypothetical protein.
     
 0.586
ADC70114.1
PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: mvu:Metvu_0433 rubrerythrin.
     
 0.586
ADC68923.1
KEGG: mja:MJ1346 glutamine synthetase (GlnA); TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
   
 
 0.567
gap
Glyceraldehyde-3-phosphate dehydrogenase, type II; KEGG: mja:MJ1146 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain.
 
 
 0.566
Your Current Organism:
Methanocaldococcus sp. FS40622
NCBI taxonomy Id: 644281
Other names: M. sp. FS406-22, Methanocaldococcus sp. FS406-22
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