STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0073Transcriptional regulator/antitoxin, MazE; COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: dra:DR_0416 ppGpp-regulated growth inhibitor suppressor ChpR/MazE, putative; PFAM: SpoVT/AbrB domain protein; SPTR: Q9RX99 PpGpp-regulated growth inhibitor suppressor ChpR/MazE, putative; PFAM: SpoVT / AbrB like domain. (80 aa)    
Predicted Functional Partners:
Deba_0072
Transcriptional modulator of MazE/toxin, MazF; COGs: COG2337 Growth inhibitor; InterPro IPR003477:IPR011067; KEGG: pph:Ppha_0265 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: B0BJH3 Putative integron gene cassette protein; PFAM: PemK-like protein.
 
 
 0.998
Deba_0074
KEGG: hmo:HM1_0635 hypothetical protein; SPTR: A6BZ10 Putative uncharacterized protein.
       0.553
Deba_0075
DoxX family protein; InterPro IPR011637; KEGG: dol:Dole_2885 DoxX family protein; PFAM: DoxX family protein; SPTR: A8ZYG3 DoxX family protein; PFAM: Methylamine utilisation protein MauE.
       0.553
Deba_0076
Rhodanese domain protein; InterPro IPR001763; KEGG: dba:Dbac_0382 rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C0GSB7 Rhodanese domain protein; PFAM: Rhodanese-like domain.
       0.553
Deba_2590
Addiction module toxin, RelE/StbE family; InterPro IPR012753:IPR007712; KEGG: bgl:bglu_1g12000 hypothetical protein; PFAM: plasmid stabilization system; SPTR: A7BX33 Plasmid stabilization system; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.
 
   
 0.506
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.