STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0075DoxX family protein; InterPro IPR011637; KEGG: dol:Dole_2885 DoxX family protein; PFAM: DoxX family protein; SPTR: A8ZYG3 DoxX family protein; PFAM: Methylamine utilisation protein MauE. (153 aa)    
Predicted Functional Partners:
Deba_0076
Rhodanese domain protein; InterPro IPR001763; KEGG: dba:Dbac_0382 rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C0GSB7 Rhodanese domain protein; PFAM: Rhodanese-like domain.
 
   
 0.922
Deba_0074
KEGG: hmo:HM1_0635 hypothetical protein; SPTR: A6BZ10 Putative uncharacterized protein.
       0.773
Deba_0072
Transcriptional modulator of MazE/toxin, MazF; COGs: COG2337 Growth inhibitor; InterPro IPR003477:IPR011067; KEGG: pph:Ppha_0265 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: B0BJH3 Putative integron gene cassette protein; PFAM: PemK-like protein.
       0.553
Deba_0073
Transcriptional regulator/antitoxin, MazE; COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: dra:DR_0416 ppGpp-regulated growth inhibitor suppressor ChpR/MazE, putative; PFAM: SpoVT/AbrB domain protein; SPTR: Q9RX99 PpGpp-regulated growth inhibitor suppressor ChpR/MazE, putative; PFAM: SpoVT / AbrB like domain.
       0.553
Deba_2629
Rhodanese domain protein; InterPro IPR001763; KEGG: tgr:Tgr7_0713 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: B8GMH3 Rhodanese domain-containing protein; PFAM: Rhodanese-like domain.
 
   
 0.528
Deba_0077
NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: sfu:Sfum_1392 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A0LI31 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase.
       0.521
Deba_0400
Conserved hypothetical protein; InterPro IPR011009:IPR000719; KEGG: dsa:Desal_2316 hypothetical protein; SPTR: C6BWU2 Putative uncharacterized protein.
  
 0.512
Deba_0954
Conserved hypothetical protein; InterPro IPR002322; KEGG: dat:HRM2_40490 hypothetical protein; SPTR: C0QC90 Putative uncharacterized protein; PFAM: Class III cytochrome C family.
  
 
 0.490
queH
Protein of unknown function DUF208; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
       0.452
Deba_1369
Thioredoxin domain-containing protein; InterPro IPR012335:IPR012336; KEGG: sfu:Sfum_3604 thioredoxin domain-containing protein; SPTR: A0LPC2 Thioredoxin domain; PFAM: Thioredoxin.
 
  
 0.447
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.