STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0136KEGG: dal:Dalk_2308 cache, type 2 domain protein; SPTR: B8FIL1 Cache, type 2 domain protein. (170 aa)    
Predicted Functional Partners:
Deba_3248
Putative cache sensor protein; InterPro IPR013163; KEGG: dal:Dalk_1114 cache, type 2 domain protein; PFAM: Cache type 2 domain protein; SPTR: B8F971 Cache, type 2 domain protein; PFAM: Cache domain.
  
  
 
0.921
Deba_2223
KEGG: dal:Dalk_2308 cache, type 2 domain protein; SPTR: B8FIL1 Cache, type 2 domain protein.
  
  
 
0.905
Deba_2128
Hypothetical protein; KEGG: gur:Gura_3066 cache type 2 domain-containing protein; SPTR: A5G619 Cache, type 2 domain protein.
  
     0.563
Deba_0135
Transcriptional regulator, TetR family; InterPro IPR001647:IPR011075:IPR009057:IPR015893; KEGG: nca:Noca_4300 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A1SPR2 Transcriptional regulator; PFAM: YsiA-like protein, C-terminal region.
 
     0.555
Deba_2990
Hypothetical protein; KEGG: gur:Gura_3066 cache type 2 domain-containing protein; SPTR: A5G619 Cache, type 2 domain protein.
  
     0.544
Deba_2126
HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: psa:PST_1581 restriction endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: Q1NP98 HNH endonuclease; PFAM: HNH endonuclease.
  
     0.511
Deba_0134
UspA domain protein; InterPro IPR006016:IPR006015:IPR014729; KEGG: dma:DMR_39250 putative universal stress protein; PFAM: UspA domain protein; SPTR: C4XNB3 Putative universal stress protein; PFAM: Universal stress protein family.
       0.479
Deba_0137
Tex-like protein; COGs: COG2183 Transcriptional accessory protein; InterProIPR018974:IPR003029:IPR016027:IPR006641:IPR 012340; KEGG: sfu:Sfum_1838 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: A0LJC1 RNA binding S1 domain protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain.
       0.458
Deba_1288
COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: scl:sce0893 hypothetical protein; SPTR: A9ETY3 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily.
  
     0.442
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.