Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_0159MgtC/SapB transporter; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: sfu:Sfum_3054 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: A0LMS6 MgtC/SapB transporter; PFAM: MgtC family. (231 aa)    
Predicted Functional Partners:
Deba_0162
Protein of unknown function DUF477; COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: sus:Acid_0973 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: Q02AF1 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477).
      0.641
Deba_0160
LemA family protein; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: pgn:PGN_1601 conserved hypothetical protein with LemA family domain; PFAM: LemA family protein; SPTR: Q7MX55 LemA protein; PFAM: LemA family.
       0.605
Deba_0163
COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001623:IPR002939:IPR008971:IPR018253:IPR 003095; KEGG: sat:SYN_00894 chaperone protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Q2LTT1 Chaperone protein; PFAM: DnaJ domain; DnaJ C terminal region.
  
    0.557
Deba_1290
COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR013767:IPR003018:IPR013656:IPR 003661:IPR003594:IPR008207:IPR005467:IPR000014:IPR000700:I PR004358:IPR001610:IPR011006:IPR009082; KEGG: dvm:DvMF_1096 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain con [...]
  
 
 0.524
Deba_3041
COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR015424:IPR002129:IPR015421; KEGG: dal:Dalk_0154 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; SPTR: B8FMJ7 Pyridoxal-dependent decarboxylase; PFAM: Pyridoxal-dependent decarboxylase conserved domain.
   
  
 0.494
Deba_2317
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.487
Deba_0158
Cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: dal:Dalk_3461 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: B8FLK3 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.471
Deba_0161
KEGG: sat:SYN_00536 putative cytoplasmic protein; SPTR: Q2LR08 Hypothetical cytosolic protein; PFAM: Nucleotidyltransferase domain.
       0.463
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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