STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_0202Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399:IPR005829; KEGG: drt:Dret_0678 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related domain protein; SPTR: C8X0M3 Mammalian cell entry related domain protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein. (500 aa)    
Predicted Functional Partners:
Deba_0204
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sat:SYN_00411 ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: protein of unknown function DUF140; SPTR: Q2LS08 ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.997
Deba_0203
ABC transporter related protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: sat:SYN_00410 ABC-type transport system, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2LS07 ABC-type transport system, ATP-binding component; PFAM: ABC transporter.
 
 0.996
Deba_0592
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR002645:IPR003453; KEGG: dba:Dbac_0468 protein of unknown function DUF140; PFAM: protein of unknown function DUF140; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C7LVW4 Putative uncharacterized protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.991
Deba_0591
ABC transporter related protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: pca:Pcar_2750 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9ZQV3 ABC transporter related protein; PFAM: ABC transporter.
 
 0.978
Deba_0590
Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: dol:Dole_1015 hypothetical protein; PFAM: Mammalian cell entry related domain protein; SPTR: A8ZWW9 Mammalian cell entry related domain protein; PFAM: mce related protein.
     
  0.900
Deba_1233
Putative anti-anti-sigma factor; InterPro IPR002645; KEGG: xca:xccb100_1462 putative anti-anti-sigma factor; SPTR: Q8P7B2 Putative uncharacterized protein.
  
 
 0.619
Deba_0589
Protein of unknown function DUF330; InterPro IPR005586; KEGG: dol:Dole_1014 ABC-type transport system auxiliary component-like protein; PFAM: protein of unknown function DUF330; SPTR: A8ZWW8 ABC-type transport system auxiliary component-like protein; PFAM: Protein of unknown function (DUF330).
  
   0.593
Deba_0200
COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685:IPR011066:IPR010920; KEGG: mbu:Mbur_2331 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: D1JF06 Putative mechanosensitive channel protein; PFAM: Mechanosensitive ion channel.
       0.592
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.581
Deba_0154
Anti-sigma-factor antagonist; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: swo:Swol_1795 anti-anti-sigma regulatory factor, SpoIIAA; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Q0AW11 Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.562
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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