Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_0217Peptidase S58 DmpA; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR005321:IPR016117; KEGG: svi:Svir_29210 L-aminopeptidase/D-esterase; PFAM: peptidase S58 DmpA; SPTR: C7MWD0 L-aminopeptidase/D-esterase; PFAM: Peptidase family S58. (334 aa)    
Predicted Functional Partners:
Deba_0218
KEGG: aav:Aave_2301 hypothetical protein; SPTR: A1TPJ0 Putative uncharacterized protein.
       0.470
Deba_0219
KEGG: sfu:Sfum_3879 hypothetical protein; SPTR: A0LQ46 Putative uncharacterized protein.
       0.401
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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