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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0323Protein of unknown function DUF134; COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: rru:Rru_A1194 hypothetical protein; PFAM: protein of unknown function DUF134; SPTR: Q2RV50 UPF0251 protein Rru_A1194; PFAM: Protein of unknown function DUF134; Belongs to the UPF0251 family. (143 aa)    
Predicted Functional Partners:
Deba_2177
COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: dds:Ddes_1867 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Q5DUA6 Putative uncharacterized protein orp (Fragment); PFAM: Dinitrogenase iron-molybdenum cofactor.
  
 0.947
Deba_0322
KEGG: hypothetical protein; SPTR: A0E9P2 Chromosome undetermined scaffold_85, whole genome shotgun sequence.
       0.773
Deba_2176
Cobyrinic acid ac-diamide synthase; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR017900:IPR002586:IPR001450; KEGG: sfu:Sfum_3409 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LNT0 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S binding domain.
 
     0.733
Deba_2175
Cobyrinic acid ac-diamide synthase; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR017900:IPR002586:IPR001450; KEGG: sfu:Sfum_3408 cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LNS9 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
     0.721
Deba_0321
KEGG: dol:Dole_0574 hypothetical protein; SPTR: A8ZU72 Conserved hypothetical cytosolic protein.
 
     0.714
Deba_2677
Beta-lactamase domain protein; COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: adg:Adeg_1793 beta-lactamase domain protein; SPTR: C9R9A2 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
 
     0.561
Deba_0859
COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: dba:Dbac_2275 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: C7LQF5 Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
 
  
 0.483
Deba_0324
InterPro IPR010305; KEGG: dsa:Desal_2293 protein of unknown function DUF903; PFAM: protein of unknown function DUF903; SPTR: C6BWR9 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF903).
       0.468
Deba_0320
Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR002197:IPR011006:IPR 009057:IPR003593:IPR020441; KEGG: dol:Dole_2401 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: A8ZVL8 Two component, sigma54 specific, transcriptional regulator, Fis fam [...]
       0.413
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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