STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0325Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: dal:Dalk_2350 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8FAV7 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. (146 aa)    
Predicted Functional Partners:
Deba_0858
Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: dal:Dalk_1038 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8FK66 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
  
     0.772
Deba_1914
Thioesterase superfamily protein; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: dal:Dalk_0151 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8FMJ4 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
  
     0.665
Deba_2380
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: dda:Dd703_2189 transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase; SPTR: C6C7N4 Transcriptional regulator, MarR family with acetyltransferase activity; PFAM: Acetyltransferase (GNAT) family.
  
     0.561
Deba_0326
COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterProIPR003660:IPR013656:IPR003661:IPR003594:IPR 017232:IPR009082:IPR000014:IPR004358:IPR005467; KEGG: gsu:GSU0812 nitrogen regulation protein NtrY, putative; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: Q [...]
       0.528
Deba_0324
InterPro IPR010305; KEGG: dsa:Desal_2293 protein of unknown function DUF903; PFAM: protein of unknown function DUF903; SPTR: C6BWR9 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF903).
       0.526
Deba_0327
Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR002078:IPR002197:IPR011006:IPR 009057:IPR003593:IPR020441; KEGG: sat:SYN_02713 response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Q2LRW3 Response regulator containing sigma 54 interaction domain; PFAM: Response regulator receiver domain; Bacterial regulat [...]
       0.512
Deba_0328
KEGG: hypothetical protein; SPTR: A2QST1 Putative uncharacterized protein.
       0.512
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.474
Deba_1017
AMP-dependent synthetase and ligase; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: dvm:DvMF_2446 phenylacetate-coenzyme A ligase, putative; PFAM: AMP-dependent synthetase and ligase; SPTR: B8DMU7 Phenylacetate-coenzyme A ligase, putative; PFAM: AMP-binding enzyme.
 
  
 0.431
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.417
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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